ASD - ALTERNATIVE SPLICING


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FIELD NAME
FIELD VALUE
  
AEdbMotif ID:39
Internal ref. ID:
Submitter name:MAREK, STEFAN
Entry date:15-SEP-2004 13:54:41
Modification date:30-JAN-2005 06:16:37
 
Regulatory sequence name:hiv-1 tat exon 2
Entry type:Exon silencer
Sequence origin:Exonic
Organism:Unknown
Binding factors:hnRNP A1
 
EMBL/Genbank/DDBJ/RefSeq Accession number:
Ensembl ID:
AEdb ID:
Sequence:CTAGACTAGA
Mutated regulatory sequence:
 
Methods:Unknown
Keywords:
 
Citation line:Amendt, B. A., Z.-H. Si, and C. M. Stoltzfus. 1995. Presence of exon splicing silencers within human immunodeficiency virus type 1 tat exon 2 and tat-rev exon 3: Evidence for inhibition mediated by cellular factors. Mol.Cell.Biol. 15:4606-4615. ; Caputi, M., A. Mayeda, A. R. Krainer, and A. M. Zahler. 1999. hnRNP A/B proteins are required for inhibition of HIV-1 pre-mRNA splicing. EMBO J. 18:4060-4067. ; Del Gatto-Konczak, F., M. Olive, M. C. Gesnel, and R. Breathnach. 1999. hnRNP A1 recruited to an exon in vivo can function as an exon splicing silencer. Mol.Cell Biol. 19:251-260. ; Si, Z., B. A. Amendt, and C. M. Stoltzfus. 1997. Splicing efficiency of human immunodeficiency virus type 1 tat RNA is determined by both a suboptimal 3' splice site and a 10 nucleotide exon splicing silencer element located within tat exon 2. Nucleic Acids Res. 25:861-867.
PubMed ID:7565800 , 10406810 , 9858549 , 9016638
 
Comments:ESS2
(activated in workbench):Y
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