ASD - ALTERNATIVE SPLICING


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FIELD NAME
FIELD VALUE
  
AEdbMotif ID:38
Internal ref. ID:
Submitter name:MAREK, STEFAN
Entry date:15-SEP-2004 13:52:45
Modification date:13-OCT-2006 08:08:51
 
Regulatory sequence name:hiv-1 tat exon 3
Entry type:Exon enhancer
Sequence origin:Exonic
Organism:Unknown
Binding factors:ASF/SF2
 
EMBL/Genbank/DDBJ/RefSeq Accession number:
Ensembl ID:
AEdb ID:
Sequence:GAAGAAGAA
Mutated regulatory sequence:
 
Methods:Unknown
Keywords:
 
Citation line:Marchand, V., A. Mereau, S. Jacquenet, D. Thomas, A. Mougin, R. Gattoni, J. Stevenin, and C. Branlant. 2002. A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding. J.Mol.Biol. 323:629-652. ; Staffa, A. and A. Cochrane. 1995. Identification of positive and negative splicing regulatory elements within the terminal tat-rev exon of human immunodeficiency virus type 1. Mol.Cell.Biol. 15:4597-4605. ; Tange, T. O. and J. Kjems. 2001. SF2/ASF binds to a splicing enhancer in the third HIV-1 tat exon and stimulates U2AF binding independently of the RS domain. J.Mol.Biol. 312:649-662.
PubMed ID:12419255 , 7623851 , 11575921
 
Comments:ESE3
(activated in workbench):Y
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