Regulatory Splicing Motifs (294 entries)

AEDBMotif ID
Regulatory sequence name
Type
Organism
Biding factors
Sequence
1cftr, exon 9Exon enhancerHomo sapiens, human
GATGAC
2cftr, exon 9Exon silencerHomo sapiens, humanSFRS1 (SF2/ASF), SFRS6 (SRp55), SFRS4 (SRp75)
TTAATTTCAAGA
3cftr, exon 13Exon enhancerHomo sapiens, humanSFRS1 (ASF/SF2), TRA2A (hTra2alpha)
GAAAGAAGAAA
4fibronectin eda exonExon silencerHomo sapiens, human
CAAGG
5fn edaExon silencerGallus gallus, chicken
CATGG
6fibronectin eda exonExon enhancerHomo sapiens, human
GAAGAAGA
7fn edaExon enhancerHomo sapiens, human
ACCTACTCTAGCCCTGA
8eiiia exonExon enhancerGallus gallus, chicken
GAAGAAGAC
9fibronectin eda exonExon enhancerHomo sapiens, human
AGGGTGACC
10fibronectin intron downstream of exon eiiibIntron enhancerRattus sp., rat
TGCATG
11igm exon m2Exon enhancerMus musculus, mouseU2 snRNA
GAAGGACAGCAGAGACCAAGAGA
12cd45, exon 5Exon silencerHomo sapiens, human
ACTCGCA
13igm exon m2Exon silencerMus musculus, mouse
CTAGTAAACTTATTCTTACGTCTTTCCTGTGTTGCCCTCCAGCTTTTATC
TCTGAGATGGTCTTCTTTCTAGA
14fn edaExon silencerHomo sapiens, human
TGTCGATTCCA
15ctnt intron 4Intron enhancerGallus gallus, chicken
GCGCTTCTTCCCTTCCCTCCTCCCTGGCTCAG
16fn edaExon silencerHomo sapiens, human
TTGGGAAAGCC
17fn edaExon silencerHomo sapiens, human
AAGTTTCC
18ewg intron 6, au 4-6Intron enhancerDrosophila melanogaster, fruit flyELAV
ATTTTTTGCTTGTCCTCATTTTA
19gh-1 intron 3Intron enhancerHomo sapiens, human
GGNNNNGGG
20ewg intron 6, au 4-6Intron enhancerDrosophila melanogaster, fruit flyELAV
ATATTTTGCTATTATACATTTTA
21gh exon 5Exon enhancerBos taurus, bovineASF/SF2
GGAAG
22dystrophin exon27Exon enhancerHomo sapiens, human
TAAAGAAGAGGCCCAACAAAAAGAAGCGAAAG
23dystrophin gene exon 27Exon enhancerHomo sapiens, human
AAGAAGAGG
24dystrophin gene exon 27Exon enhancerHomo sapiens, human
AAGAAGCGAA
25calcitonin (ct) exon 4Exon enhancerHomo sapiens, human
CACCTGGAAAGAAAAGGGATATGTCCAGCG
26calcitonin (ct) exon 4Exon enhancerHomo sapiens, human
GAGACTTCAACAAGTTTCACACG
27dsx exon 4Exon enhancerDrosophila melanogaster, fruit flySR proteins, Tra, Tra2
CTTCAATCAACAT
28dsx exon 4Exon enhancerDrosophila melanogaster, fruit flySR proteins, Tra, Tra2
CAACAATCAACAT
29dsx exon 4Exon enhancerDrosophila melanogaster, fruit flyTra/Tra2
TCWWCRATCAACA
30cd45, exon 6Exon silencerHomo sapiens, human
ACCTGCACGCA
31dsx exon 4Exon enhancerDrosophila melanogaster, fruit flyTra/Tra2
AAAGGACAAAGGACAAAA
32c-src intron b downstream of exon n1Intron enhancerMus musculus, mouseKSRP, p53/hnRNP F
AGGCTGGGGGCTGCTCTCTGCATGTGCTTCCT
33thyroid hormone receptor , exon 9Intron enhancerRattus sp., ratSF2/ASF, hnRNP H
GGAGAGAAGGGA
34c-src n1 exonExon enhancerMus musculus, mouseASF/SF2,hnRNP A1,H,F
GAGGAAGGTG
35a-tropomyosin gene exon 5/skExon silencerHomo sapiens, human
TAAGTGTTCTGAGCTGGAGGAGGAGCTGAAGAATGTCACCAACAACCTCA
AGTCTCTTGAGGCTCAGGCGGAGAAG
36cd44 exon v5Exon enhancerMus musculus, mouse
GCTACAAGCA
37hiv-1 tat exon 2Exon enhancerUnknownASF/SF2
GAAGAAGCGGAGACAGCGACG
38hiv-1 tat exon 3Exon enhancerUnknownASF/SF2
GAAGAAGAA
39hiv-1 tat exon 2Exon silencerUnknownhnRNP A1
CTAGACTAGA
40hiv-1 tat exon 2Exon silencerUnknownhnRNP H
TTGGGT
41hiv-1 tat-rev exon 3Exon silencerUnknown
AGATCCATTCGATTAGTGAA
42hiv-1 exon 6dExon silencerUnknownASF/SF2, SC35
GAAAGGAGA
43thyroid hormone receptor , exon 9Intron enhancerRattus sp., ratSF2/ASF, hnRNP H
GAGGGAG
44mvm ns2Exon enhancerUnknown
ACACC
45hiv-1 tat-rev exon 3Exon enhancerUnknown
GAAGAAGAAGGTGGAGAGAGAGACAGAG
46tat-rev exon 3Exon silencerUnknownhnRNPA1, SC35
TTAG
47cgrp intron 3Intron enhancerMus musculus, mousePTB, U1 snRNA
CAGGTAAGAC
48ftdp-17 tau exon 10Exon enhancerHomo sapiens, humanTra2beta
TCTTAGCAACGTCCAG
49beta-tm exon 5, 6Exon enhancerRattus sp., ratASF/SF2
GARGARGAR
50ftdp-17 tau exon 10Exon silencerHomo sapiens, humanTra2beta
TCAAAGGATAATATCAAA
51beta-tm exon 8Exon enhancerRattus sp., rat
AAAGAGGAC
52beta-tm exon 7Exon silencerRattus sp., rathnRNP H
TGTGGG
53beta-tm exon 8-2Exon enhancerRattus sp., ratASF/SF2
GAAGAAGAG
54caldesmon exon 5Exon enhancerHomo sapiens, human
GAGGAAGAGAAAAGGGCAGCAGAGGAGAGGCA
55beta tropomyosin intron ivs abIntron silencerGallus gallus, chicken
CCCTCTCTCTATCGCTGTCTCTTGAGCCACGCC
56beta tropomyosin intron 6Intron enhancerHomo sapiens, human
WGGG
57fgfr-2 k-sam(iiib)Exon silencerHomo sapiens, human
TAGGGCAGGC
58mvm ns-specific exonExon enhancerUnknown
AGAGATCGAGGAGGATTTGAGAG
59fgfr-1 alpha exonExon enhancerHomo sapiens, humanSRp55
GTGACCTGCTGCAG
60fgfr-1 alpha exonExon enhancerHomo sapiens, humanSRp55
GACGGGGTGCAGCTGGCGGAAAGCAACCGCACCCGCATCACAGGGGAGGA
GGTGGAGGTGCAGGACTCCGTG
61fibroblast growth factor receptor-2, exon bekExon silencerHomo sapiens, humanPTB
TCTTTAGGTTCCCTTTCAATTCT
62clathrin light chain b exon enExon enhancerRattus sp., rat
ACAAAGCGTTCTACCAGCAGCCAGATGCTG
63insulin receptor exon 11 upstream intronIntron enhancerHomo sapiens, human
GTAGTGGGACCCAGAGACGGCAGAAGGGTGGGTGGAGTCTGAATGGAG
64insulin receptor exon 11 upstream intronIntron silencerHomo sapiens, human
TTACTCGGACACATGTGGCCTCCAAGTGTCAGAGCCCAGTGGT
65cd44 exon v4Exon enhancerHomo sapiens, humanYB-1
CAACCACAA
66cd44 exon v5Exon silencerMus musculus, mousehnRNP A1
AGACAGAATCAGCACCAGTGCTCATGGAGAAAATTGGACCCCGGAACCAC
AGCCTCCTTTCAATAACCAT
67cd44 exon v5Exon enhancerMus musculus, mouse
ATGAAGAGGA
68cd44 exon v9Exon enhancerHomo sapiens, human9G8, ASF/SF2, SRp20
GGAAGAAGATAAAGAC
69cd45 exon 4Exon silencerHomo sapiens, human
GTGACCCCTTACCTACTCACACCACTGCATTCTCACCCGCAAGCACCTTT
G
70ct/cgrp intron downstream from exon 4Intron enhancerHomo sapiens, humanPTB
CTCCGCTCCTCTTC
74ewg intron 6, au 4-6Intron enhancerDrosophila melanogaster, fruit flyELAV
ATTTTTATTTTTAATTATTGTT
75cd45 tyrosine phosphataseExon enhancerHomo sapiens, human
AACACCT
78cd45, exon 4Exon silencerHomo sapiens, human
ACYYGCAMGCA
79ct/cgrp intron downstream from exon 4Exon enhancerHomo sapiens, humanPTB
TTTTTCCC
80c/cgrp exon 3Exon enhancerRattus sp., ratSRp40, 37-kDa protein
GAAGAAGAAG
81c/cgrp exon 4Exon enhancerRattus sp., ratSRp55
GGAGCACCTGGC
82c/cgrp exon 4Exon enhancerRattus sp., rathTra2 beta
AGACCTCAACAAGTTTCACACC
83gagExon silencerRous Sarcoma virusHnRNP H
CGAATCGACAAAGGGGAGGAAGTGGGAGAAA
84gagExon silencerRous Sarcoma virusSF2/ASF
AGAAACCAGCAACGGAGCGGCGAAT
85e1a exon 2Exon enhancerAdenovirus family9G8
GACGACGAG
87e1a exon 2Exon enhancerAdenovirus familyASF/SF2
GATGAAGAG
88avian sarcoma virus envExon enhancerRous Sarcoma virus
AAGAAGAAG
89gaba-a, gamma-aminobutyric acid (gaba-a) receptor, intron 9Intron enhancerMus musculus, mouseNova-1
TCATTTTCAGATTCATCATCTCAT
90eiav tat/rev exon 3Exon enhancerAdenovirus familyASF/SF2
AAGAAGAAAAAAGAAGAAA
91ftdp-17 tau exon 10Exon enhancerHomo sapiens, humanTra2beta
AAGAAGAAG
92g-alpha-s exon 3Exon enhancerHomo sapiens, humanASF/SF2
AAGAGGA
93beta-globin exon 1Exon enhancerHomo sapiens, humanSC35
TGCCGTT
94beta-globin exon 2Exon enhancerHomo sapiens, humanASF/SF2
GGACAA
95beta-globin exon 2Exon enhancerHomo sapiens, human
TGGACCCAGAGGT
96beta-globin exon 2Exon enhancerHomo sapiens, humanSC35
TGCTGTT
97grh exon 4Exon enhancerRattus sp., ratTra2-alpha
GAAGAGGAAG
98gnrh exon 3Exon enhancerHomo sapiens, human
AAGAGATGGGCAAGGAGGTGGA
99igf i, exon 5Exon enhancerHomo sapiens, humanASF/SF2
ATCCAGGAGGGGAACAGA
100f1 gamma, exon10Exon enhancerMus musculus, mouse
AAAGAAGGAAA
101f1 gamma, exon 9Exon silencerHomo sapiens, human
AGTTCCA
102mvm ns-specific exonExon enhancerUnknown
GAAGAAAGA
103mvm ns2Exon enhancerUnknown
CACCA
104calca: calcitonin/calcitonin-related polypeptide, alpha, exon 4Exon enhancerRattus sp., rathTra2 , SRp55
GACCTCAACAAGT
105ncam exon 17Exon enhancerMus musculus, mouseSR protein
GGGGGGAAGCACACAGAGCCCAACGAGACCAC
106smn1 exon 7Exon enhancerMus musculus, mouseSF2/ASF
CAGACAA
107smn1 exon 7Exon enhancerHomo sapiens, humanHtra2;?, hnRNP;G, SRp30c
AAGAAGGAAGG
108calca: calcitonin/calcitonin-related polypeptide, alpha, exon 4Exon enhancerRattus sp., rathTra2 , SRp55
AAGAAAAGGGA
109smn2 exon 7Exon silencerHomo sapiens, humanhnRNP A1
TAGACA
110sr protein 9g8 exon 3Exon enhancerHomo sapiens, human9G8, SC35, ASF/SF2
GAAGAAGAA
111sr protein 9g8 exon 4Exon enhancerHomo sapiens, human9G8, SC35
AGAGGAAGGCGA
112sr protein 9g8 exon 4Exon enhancerHomo sapiens, human9G8, SC35
AGGAGCAGGGGACGAAG
113xi collagen, exon 6bExon enhancerMus musculus, mouse
GAAGAAGA
114xi collagen exon 6bExon enhancerMus musculus, mouse
CAAGCATCAGCAAAAGCCAAAC
115mypt1, exon3Exon enhancerGallus gallus, chicken
TGAATGAAGGTCCTACATCCT
116mypt1,exon3Exon silencerGallus gallus, chicken
AACACAAGTT
1174.1r exon 16Exon silencerUnknownhnRNP A/B
ATAGCA
118bdv polymerase exonExon silencerUnknown
CTAGATATGGATCCCGACTTCAACGATATTGTTAG
119agrin y, exon 28Intron enhancerMus musculus, mouse
ACTCACC
120dna ligase iii, beta exonExon silencerHomo sapiens, human37 Kd protein
CCAAGTCAAAATTTAC
121hiv exon 3Exon silencerUnknownhnRNP A/B
TTAGGACGTATAGTTAGTCCTAGG
122tev exon 6dExon enhancerUnknownhnRNP H
GGGA
123tropomyosin, exon skExon enhancerUnknownTra2beta/hnRNPG
AAGTGTT
124cardiac troponin t exon 17Intron enhancerGallus gallus, chicken
GTAAGTACAGGCTGCATGCCTCCCACCACACCTGTGCTGCATGGACACCT
GGGGCTGACCTTGCAACAGAAGTGGGGCTGAGGGAAGGACTGTCCTGGGG
ACTGGTGTCAGAGCGGGGTTGGTGACTCTCAGGATGCCCAAAACACCCA
125cardiac troponin tExon enhancerHomo sapiens, humanSRp30a, SRp40,SRp55, SRp70
GAGGAAGAA
126b3, artificialExon enhancerartificial, (e.g., transgenic mouse)SRp40
TCGACATTGGGAGCAGTCGGCTCGTGC
127thyroid hormone receptor , exon 9Intron enhancerRattus sp., ratSF2/ASF, hnRNP H
GGTGGGGAGGAG
128tra2 beta1,Exon enhancerHomo sapiens, humanTRA2 BETA1
GAAAGAAT
129tra2 beta1,Exon enhancerHomo sapiens, humantra2 beta1
GAAAGAAG
130dmd, pseudo exon from intronExon enhancerHomo sapiens, humanhnRNP G, Tra2
AAGTAACAA
134tra2 beta1,Exon enhancerHomo sapiens, humanTRA2 BETA1
GAAGAATGAAGAAA
135caspase-2, exon 9Intron silencerMus musculus, mousePTB
TCTTCCTTCTCT
136caspase-2, exon 9Intron silencerMus musculus, mousePTB
TTTCTCT
138brca1 exon 5Exon enhancerHomo sapiens, humanSRp55
TTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCC
TTTATGTAAGAATGATATAACCAAAAG
142gh1: growth hormone 1, exon3Exon enhancerHomo sapiens, human
AAGAAGC
143gh1:growth hormone 1, intron3Intron enhancerHomo sapiens, human
GGGGAT
144gh1:growth hormone 1, intron3Intron enhancerHomo sapiens, human
GATGGGGGAGACCTGTA
145c-src, exon n1Intron silencerMus musculus, mousePTB/nPTB, KSRP, FBP,hnRNP H, hnRNP F
TGCATG
147cftr:cystic fibrosis transmembrane receptor, intron 9Intron silencerHomo sapiens, humanSF2/ASF, SC35, SRp75
AATGTATGGGTGTAGTGTCTTGTATAATAGAAATTGTTCCACTGATAATT
TACTCTAGTTTTTTATTTCCTCATATTATTTTCAGTGGCTTTTTCTTCCA
CATCTTTATATTTTGCACCACATTCAACACTGTATCTTGCACATGGCG
1484.1r exon 16Intron enhancerHomo sapiens, human
ATTTATTTTTAAATATTTTTTGGTTTGCCAATTTTCAGTTTTTTCCCG
1494.1r exon 16Intron enhancerHomo sapiens, human
TGTATGAACTTGAAGCTTATTTCAGTTGGTTGCCTGGAACCTTCTGCATT
CTTTGCTGATCCCCTTTTCTTCATTCTGTGCTGCATTTGGTTTTGCATGC
AATTGCATGAAGGGACTTTAGGTTTAAAATGCTTTTGCATGTT
150alpha-actinin, nm/sm exonsIntron enhancerRattus sp., ratETR-3*, Brul*
GTCTGTGTGTCTAACTGT
151agrin y, exon 28Intron enhancerMus musculus, mouse
ATCTTTTGT
152agrin y, exon 28Intron enhancerMus musculus, mouse
TTACC
153amp deaminase 1 exon 2Intron enhancerHomo sapiens, human
GCCCAGGCTGGAGTGCAGTA
154amp deaminase 1 exon 2Intron enhancerHomo sapiens, human
CCATCGAATGCATTTACTT
155amyloid precursor protein, exon 8Intron enhancerHomo sapiens, human
ATGTTT
156amyloid precursor protein, exon 8Intron enhancerHomo sapiens, human
TTT
157calcitonin/ cgrp exon 4Intron enhancerRattus sp., rat
CCAAGGGAAAGCATGGGTTAACCTA
158calcitonin/ cgrp, exon 4Intron enhancerRattus sp., rat
CAGCCCTGGTGCATGGCACTGCCTC
159cardiac troponin t, intron 2Intron silencerGallus gallus, chickenPTB*, U2AF65
CCTCTGCGCTTCTTCCCTTCCCTCCTCCCTGGCTCA
160calcitonin/ cgrp, exon 4Intron enhancerHomo sapiens, humanPTB*, ASF/SF2*,
CTCCGCTCCTCTTCCAGGTAAGAC
161cardiac troponin t, exon 5Intron enhancerGallus gallus, chickenPTB, ETR-3
TTTCTTTGTTCCA
162cardiac troponin t, exon 5Intron silencerGallus gallus, chickenPTB, ETR-3
ACTGCACCTTTCTTTGTTCCATCTCTCCACCTCTGCTGTG
163cardiac troponin t, exon 5Intron enhancerGallus gallus, chickenETR-3*, PurH*
TGTGTCCTGTG
164tra2 beta1,Exon enhancerHomo sapiens, humanTRA2 BETA1
GAAGAAGGAAA
165cardiac troponin t, exon 5Intron silencerGallus gallus, chickenPTB*
TTTCCTTTCATTCTTTCACTTCT
166caspase-2, exon 9Intron silencerMus musculus, mouseU2 snRNP
GCTTATTAACTGCAATGTACTTTTTATTGTTTTTCATTCCAGTTAAGG
167caspase-2, exon 9Intron silencerMus musculus, mousePTB
TCTTCC
168chloride channel clc-1, intron 2Intron enhancerHomo sapiens, humanCUG-BP*
GTTTGTTTGTTTGTTTGTTGTTTGTTTGTTTG
169clathrin light chain b exon enIntron silencerRattus sp., ratPTB, CUG-BP
CTGTCTTGCTGTCT
170c-src, exon n1Intron silencerMus musculus, mousePTB/nPTB
CTCTCT
171c-src, exon n1Intron silencerMus musculus, mousePTB/nPTB, KSRP, FBP,hnRNP H, hnRNP F
GGGGGCTG
172c-src, exon n1Intron silencerMus musculus, mousePTB/nPTB, KSRP, FBP,hnRNP H, hnRNP F
CTCTC
173dmpk ,exon 16Intron enhancerHomo sapiens, human
CTGN
174fibroblast growth factor receptor 1, exon alphaIntron silencerHomo sapiens, humanPTB
AATGCTGCTACAGCTGCTTCCTAACTTTGCCTCTTTCTTC
175fibroblast growth factor receptor 1, exon alphaIntron silencerHomo sapiens, human
ATCTGCCCCCACTCTGCTTCAGAAACTGCTGCCCACTAACATTGCTCCCT
GCCTGCCGCGTG
176fibroblast growth factor receptor 2 , exons bek/k-sam (iiib/iiic) exonsIntron enhancerHomo sapiens, human
CTTTCATTTTTGTCTTTTTTT
177fibroblast growth factor receptor 2 , exons bek/k-sam (iiib/iiic) exonsIntron enhancerHomo sapiens, human
CCATGGAAAAATGCCCACAAC
178fibroblast growth factor receptor 2 , exons bek/k-sam (iiib/iiic)Intron enhancerHomo sapiens, human
TGTGGGTTGATTTTTTCCATGCGTTTGATTGCGTGCATGTGTAGGAGGTG
AAGCCGGTGT
179fibroblast growth factor receptor 2 , exons iiib/iiicIntron enhancerRattus sp., rat
GGGCTGATTTTTCCATGT
180fibroblast growth factor receptor 2 , exons iiib/iiicIntron silencerRattus sp., rat
GGGCTGATTTTTCCATGT
181fibroblast growth factor receptor 2 , exons iiib/iiicIntron silencerRattus sp., ratPTB
CTCCTCCCTC
182fibroblast growth factor receptor 2 , exons iiib/iiicIntron silencerRattus sp., rat
TGGTGGGACCATAGGCAGCAC
183fibronectin, exon eiiibIntron enhancerRattus sp., rat
TGCATG
184gaba(a) receptor subunit gamma2Intron silencerRattus sp., rat
TGTTTCTCTTTCTCTCCTTT
185gaba(a) receptor subunit gamma2Intron silencerRattus sp., ratPTB
CCTTTTCCTTCTTCTTATT
186gaba(a) receptor subunit gamma2Intron silencerRattus sp., ratPTB
GCAATTCTCTTTTCTGTCT
187gaba(a) receptor subunit gamma2Intron enhancerRattus sp., rat
ACAAATCCA
188gag geneIntron silencerRous Sarcoma virushnRNP H, SF2/ASF
CCGGAGTGCTCGAGAAACCAGCAACGGAGCGGCGAATCGACAAAGGGGAG
GAAGTGGGAGAAACAACTGTGCAGCGAGATGCGAAGATGGCGCCGGAGGA
AACGGCCACACCTAAAACCGTTGGCACATCCTGCTATCATTGCGGAACAG
CTATTGGCTGTAATTGCGCCACAGCCTCGGCTCCCTCCTCCTCCTTATGT
GGGGAGTGGTTTGTATCCTTCCCT
189glycine receptor alpha2, exon 3aIntron enhancerHomo sapiens, humanNova-1
TCATCATCATTTTCAT
190hnrnp a1, exon 7bIntron enhancerMus musculus, mousehnRNP A1
TAGAGT
191hnrnp a1, exon 7bIntron enhancerMus musculus, mousehnRNP A1
AGCTAGATTAGACTTCTAGAGTTT
192hnrnp a1, exon 7bIntron silencerMus musculus, mouse
CCTGCTCTGCTGTGCTACCTCCTCCTGGCTTTAAGCTGGGGCCGCCTCCC
CAAAATAAGTAGGTGAATGAGTGGTTA
193hnrnp a1, exon 7bIntron silencerMus musculus, mouse
CTGGATTATTAA
194bpv-1 late rnaExon enhancerUnknownYB-1
CACCACCACC
195major late region 1 (l1) 52,55k/iiiaIntron silencerAdenovirus familySR proteins
GCGTGGAGGAATATGACGAGGACGATGAGTACGAGCCAGAGGACGGCGA
196bpv-1 late rnaExon silencerUnknownU2AF, PTB
TCTTCTT
197major late region 1 (l1) 52,55k/iiiaIntron enhancerAdenovirus family
AGTACTAAGCGGTGATGTTTCTGATCAG
198bpv-1 late rnaExon silencerUnknownSRp55, SRp30s
GGCTCCCCC
199mvm, ns2-specific exon, small intronIntron enhancerUnknown
GGATGGTTGGTTGGTGGGG
200bpv-1 late rnaExon silencerUnknownASF/SF2
AGAGCAGG
201myosin heavy chain, exon 11eIntron silencerDrosophila melanogaster, fruit fly
ATGTACCATGTACC
202bpv-1 late rnaExon silencerUnknown
TGGT
203myosin heavy chain, exon 11eIntron enhancerDrosophila melanogaster, fruit fly
AGTGCTGTGT
204myosin heavy chain, exon 11eIntron enhancerDrosophila melanogaster, fruit fly
ATCCATCCCTCTATCTATCCCAGTTCAACCTGTCCAAAAGTGTTTTTGAA
GAACCGCTTAAGCATAAGCAAAAAAA
205bpv-1 late exon 2Exon enhancerUnknownSRp75, SRp55, SRp30a
GAAGGA
206bpv-1 late exon 2Exon enhancerUnknownSRp75, SRp55, SRp30a
GAAGAA
207ncam, msdb exonIntron silencerMus musculus, mouse
GACCTCACTGACCCAGCTGGGCCTTTGTCACATTGGGGGAGCCTGGTTCT
TTCCTCTCATTCTCTTAACTGTCTATACTTTAGTTCTTTGAATCTGGAGG
AGTGGAACAGGTCCACTCTTTGGAAACTTGAACCTGGCTTTCTAGT
208nmda, exon 5Intron silencerRattus sp., ratPTB, CUG-BP
GCTTTAGCGCCGTCATTTTCAACCGTTTATAATCTTCTTCTGTGTCTGCA
TATTTTCTCTGTGCACATTATTCATCAG
209nonmuscle myosin ii heavy chain b, exon n30Intron enhancerHomo sapiens, human
TGCATGTCGTACTGCATGT
210nova-1, exon hIntron enhancerMus musculus, mouseNova-1
TCATCCTCTCATCTACACCAT
211sex lethal, exon 3Intron silencerDrosophila melanogaster, fruit flySxl
TTTTTTTT
212slo k+ channel, strex exonIntron silencerMus musculus, mouse
CTCTTCCTC
213tat, intron 2Intron silencerUnknownhnRNP A1
TAGTGAATAGAGTTAGGCAGGGA
214tau, exon 10Intron silencerHomo sapiens, human
TCACACGT
215tau, exon 10Intron enhancerHomo sapiens, human
CCCATGCG
216thyroid hormone receptor , exon 9Intron enhancerRattus sp., ratSF2/ASF, hnRNP H
GGGTG
217transformer, exon 2Intron silencerDrosophila melanogaster, fruit flySxl, U2 snRNP
TTTTTTTT
218alpha-tropomyosin, intron2Intron silencerRattus sp., rat
ATCACGCTGCCTGCTGCA
219alpha-tropomyosin, intron 3Intron silencerRattus sp., ratPTB
TCTTCTT
220beta-tropomyosin, exon 6a/6bIntron enhancerGallus gallus, chickenASF/SF2, SC35, PTB, hnRNP K
CCCCTCTCTCTATCGCTGTCTCTTGAGCCACGC
221beta-tropomyosin, exon 6a/6bIntron enhancerGallus gallus, chickenTLS
GCTGGGGCTGGGCAGAGCGCGCAGGGTTGAGGGGAGCAGGGTCCTTCACT
GGGGTGAA
222beta-tropomyosin, exon 6/7Intron silencerRattus sp., ratPTB, Sam68, FBP
AACCCCACCCCCTCACCCCGTGCTCGCGCCACCCCACTGTCTCACCTCAC
TGTGCCCTCACGCTCCATCCTGCCACACGCCCCTGCAG
223pcca: propionyl coenzyme a carboxylase, alpha polypeptide(intron2)Exon silencerHomo sapiens, human
AATGTG
224pcca: propionyl coenzyme a carboxylase, alpha polypeptide(intron3)Exon silencerHomo sapiens, human
TATTTATT
228opa1: optic atrophy 1 (autosomal dominant), exon9Exon silencerHomo sapiens, human
TTAAGGT
229opa1: optic atrophy 1 (autosomal dominant), exon11Exon silencerHomo sapiens, human
TGAGACC
231mypt1 , intron 5Intron enhancerGallus gallus, chicken
TCTTGTCTT
233mypt1 , intron 5Intron enhancerHomo sapiens, human
AAAGTAATACCTCCTATTTATTTCCCTGGAAACTACAGCAGTTACAAAGA
GCACAATAACACTATTT
234mypt1 , exon 5Exon enhancerGallus gallus, chicken
TCCTACATCCT
235mypt1 , exon 5Exon silencerGallus gallus, chicken
TTAAACACAAGTT
236mypt1 , intron 5Intron silencerGallus gallus, chicken
CAGTTGTACATGGTTCCTATCTCACAGGATTATTTTGGAAGAGATGATAT
CCAGCAATTATATACATAATTAACTTTACTCCACTATGTAGAATTTAAGT
GAAATTCATTTATATTAATGGAGTGAACAATCCATATCTAAAGGAAAAGA
TCAAAGAGAAGAATCTGACATTTGGGTAGCTAAGTTATGTACTTCTATGT
GCTGGTGATGTAAGTGGTGACAGGTGCTTAACTTCTTTTTTTCAGCTGTG
CCATTGATGTTTTTAGTGGCATGCGATCAGTCTATTTCATATAGCATAAT
ACATCTTCTGTTTTTGTTAACCTCTTATCTTAAAACAAAAGCGAAGTTTT
CTTAACTTCACATTTAGGAAAATTGTTGCACAGATTTCATGTTCTGAATG
GGAAACAACGGTTAGGTTAATGAAAACAGTCCTTGCATGTTAGTCTTTTT
CAGTGTTAATGTTCCAGACTTCAAATGCAACGTATTCATCATGTTTATAT
GATATGTAGTGCTTCCACTGTATATT
237smn2: survival of motor neuron 2, centromeric,exon7Exon enhancerHomo sapiens, humanSR protein
CAGACAA
238brca1, exon18Exon enhancerHomo sapiens, humanSFRS1 (SF2/ASF)
CTGAGTT
239cftr, exon12Exon enhancerHomo sapiens, humanSFRS1 (SF2/ASF)
AAGATGC
240gaba-a, gamma-aminobutyric acid (gaba-a) receptor, intron 9Intron enhancerMus musculus, mouseNova-1
CCATCGTAAGATCACGATGTCAT
241gdap1: ganglioside-induced differentiation-associated protein 1Exon enhancerHomo sapiens, human
ATCAGGC
243tra 2Intron enhancerDrosophila melanogaster, fruit fly
CAACCAACC
261hnrnpg binding motifExon enhancerHomo sapiens, humanhnRNPG
AAGT
281beta-tm exon 6-1Exon enhancerRattus sp., ratASF/SF2
GAGGAGGAG
282gnrh exon 4Exon enhancerUnknown
GGAAAGTCTGATTGAAGAGGAAGCCAGGCAGAAGAAGA
283gnrh exon 4Exon enhancerUnknownTra2 alpha
GGAAAGTCTGATTGAAGAGGAAGCCAGGCAGAAGAAGA
284f1 gamma, exon9Exon enhancerMus musculus, mouse
AATGAAAA
285g-alpha-s exon 3Exon enhancerHomo sapiens, humanASF/SF2, SC35
CGCAGGC
286g-alpha-s exon 3Exon enhancerHomo sapiens, humanSC35
GGACCCGCAGGCTGCAA
287g-alpha-s exon 3Exon enhancerHomo sapiens, humanSRp40
CAACAGCG
288aslv, exon3Exon enhancerUnknown
CTCCAAGAAGAAGCCGCCAGCAACAAGCAAGAAGGA
289hprt, exon3Exon silencerHomo sapiens, human
GAGATGTGATGAAGGAGATGGGAGG
290ctnt, exon5Exon silencerGallus gallus, chicken
AAGAGGAAGAATGGCTTGAGGAAGACGACG
291bgh, exon5Exon enhancerBos taurus, bovine
TCTCCTGCTTCCGGAAGGAC
292tev exon 6dExon enhancerUnknown
GAGAAAGGAGAGA
293hiv, exon3Exon silencerUnknownhnRNP A/B
AGATCCTAGACTAGAGCCCT
301cftr, intron 9Intron enhancerHomo sapiens, humanPTBP1, TIA1
TTCTTTT
302cftr, intron 9Intron enhancerHomo sapiens, humanPTBP1, TIA1
TTCTTC
303cftr, intron 9Intron enhancerHomo sapiens, humanPTBP1, TIA1
TCTCTTTTTTTTTCTA
321purine-rich eseExon enhancerHomo sapiens, humanSF2/ASF, SC35
TGATGGAGA
322ighg2 cgamma2 (immunoglobulin heavy chain subclass g2 - cgamma2 gene) - intron 1Intron enhancerHomo sapiens, human
GTGAG
323cctra, exon 1Exon enhancerUnknowntra/tra2
TCTACAATCAACA
324cctra, exon 2Exon enhancerUnknowntra/tra2
ACTACAATCAACA
325cctra, exon 2Exon enhancerUnknowntra/tra2
ACAACAATCAACT
326cctra, intron 2Intron enhancerUnknowntra/tra2
GTTTCAATCATAA
327cctra, exon 2Exon enhancerUnknowntra/tra2
CATTCAATAAACT
328cctra, intron 1Intron enhancerUnknowntra/tra2
CCTTCAATTGTCG
330β-tropomyosin, exon 6bIntron enhancerGallus gallus, chickenhnRNP F/H
GGGGCTG
331β-tropomyosin, exon 6bIntron enhancerGallus gallus, chicken
TGGGC
332β-tropomyosin exon, 6bIntron enhancerGallus gallus, chickenhnRNP A1
AGGGT
333β-tropomyosin exon, 6bIntron enhancerGallus gallus, chickenhnRNP A1
AGGGT
334β-tropomyosin exon, 6bIntron enhancerGallus gallus, chickenhnRNP A1
GGGGA
335fn eda exonExon silencerUnknown
CAAGGCC
336β-tropomyosin exon, 6bIntron enhancerGallus gallus, chickenNA
TGGGGT
337fn edaExon enhancerUnknown
TGTCGATTCCA
338bpv-1 late exon 2Exon enhancerUnknownYB-1
ACCACCACC
340beta-tm, exon7Exon enhancerRattus sp., rat
GAGGAGGAG
341alpha-tm, exon2Exon enhancerRattus sp., rat
AAGAGAAG
342mas gamma-subunit, exon 10Exon enhancerMus musculus, mouse
AAGAAGGAA
343gh-1, exon 3Exon enhancerHomo sapiens, human
GAAGAA
344cd44, exon 10 (v6)Exon enhancerHomo sapiens, human
CCAGAAGGAAC
345fgfr1, alpha exonExon enhancerHomo sapiens, humanSRP55
GTGACCTGCTGCAG
346fgfr1, alpha exonExon silencerHomo sapiens, humanSRP55
CTTCGCTGTCGGC
347fgfr1, alpha exonExon enhancerHomo sapiens, humanSRP55
TGCGGGACGATGTGCAGA
348ctnt, exon 5Intron enhancerHomo sapiens, humanGST-MBNL1
YGCTKY
363presenilin 2, exon 5Exon enhancerHomo sapiens, humanSR protein
GGTGGGCCAGCGCCTCC
370cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTAACAG
371cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTTTTTTTTTAACAG
372cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTTTTTTTTTAACAG
373cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTAACAG
374cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTTTTTTTAACAG
375cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTTTTTTTAACAG
376cftr, intron 8Intron enhancerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTAACAG
377cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTGTTTTTAACAG
378cftr, intron 8Intron silencerHomo sapiens, human
TTTTGATGTGTGTGTGTGTGTGTGTGTGTTTTTAACAG
380nova k-homology domain,kh1/2Intron silencerHomo sapiens, humanNova antigens
TCAGTCAC
381nova k-homology domain,kh3Intron silencerHomo sapiens, humanNova antigens
TCAC
391grin1, ci cassette exonExon silencerHomo sapiens, humanhnRNP A1
TAGG
392grin1, ci intronIntron silencerHomo sapiens, humanhnRNP H family
GGGG
410fgfr-1 alpha exonExon silencerHomo sapiens, humanSRp55
CTTCGCTGTCGG
411fgfr-1 alpha exonExon enhancerHomo sapiens, humanSRp55
CTGCGGGACGATGTGCAGA
432pre, intron between exons 2 and 3Intron enhancerDrosophila melanogaster, fruit fly
AGAAACGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGACGGGGAGAAAAG

434asf/ sf2-exonic splicing enhancerExon enhancerUnknownASF/ SF2
SRSASGA
435srp40-exonic splicing enhancerExon enhancerUnknownSRp40
ACDGS
436srp55-exonic splicing enhancerExon enhancerUnknownSRp55
TSCGKM
437rsf1-exonic splicing enhancerExon enhancerUnknownRSF1
CAACGACGA
438rsf1-exonic splicing enhancerExon enhancerUnknownRSF1
AAACGCGCG
439sc35 - exonic splicing enhancerExon enhancerHomo sapiens, humanSC35
GRYYCSYR
440srp40 - exonic splicing enhancerExon enhancerUnknownSRp40
YRCRKM
441sc35 - exonic splicing enhancerExon enhancerUnknownSC35
GRYYMCYR
442srp55 - exonic splicing enhancerExon enhancerUnknownSRp55
YYWCWSG
443asf/sf2 - exonic splicing enhancerExon enhancerUnknownASF/SF2
CRSMSGW
470cftr, exon 12Exon enhancerHomo sapiens, humanSFRS1 (SF2/ASF)
GGATAC